Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonium transporter nrga | PAM7971_01224 | Not Available | Negative | 1270188 - 1271507 | 46088.0 |
| nitrogen regulatory protein p-ii | PAM7971_01225 | Not Available | Negative | 1271542 - 1271880 | 12040.7 |
| penicillin-binding protein 1a | PAM7971_01226 | Not Available | Positive | 1272147 - 1274369 | 79198.4 |
| toluene tolerance, ttg2 | PAM7971_01227 | Not Available | Negative | 1274454 - 1275068 | 21855.3 |
| putative phospholipid-binding lipoprotein mlaa precursor | PAM7971_01228 | Not Available | Negative | 1275061 - 1275810 | 26787.4 |
| type i secretion system atp-binding protein prsd | PAM7971_01229 | Not Available | Positive | 1276011 - 1277741 | 61275.9 |
| type i secretion system membrane fusion protein prse | PAM7971_01230 | Not Available | Positive | 1277738 - 1279117 | 49843.0 |
| endoribonuclease l-psp | PAM7971_01231 | Not Available | Positive | 1279143 - 1279607 | 15692.1 |
| glycerophosphoryl diester phosphodiesterase | PAM7971_01232 | Not Available | Positive | 1279611 - 1280369 | 27818.3 |
| hypothetical protein | PAM7971_01233 | Not Available | Positive | 1280412 - 1281599 | 44108.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
