Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmc | PAM7971_01214 | Not Available | Positive | 1261023 - 1261712 | 24854.3 |
| eama-like transporter family protein | PAM7971_01215 | Not Available | Positive | 1261745 - 1262590 | 30704.7 |
| soluble lytic murein transglycosylase precursor | PAM7971_01216 | Not Available | Negative | 1262593 - 1264518 | 70733.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | PAM7971_01217 | Not Available | Positive | 1264710 - 1265582 | 30279.7 |
| hypothetical protein | PAM7971_01218 | Not Available | Negative | 1265767 - 1265916 | 5325.7 |
| ssra-binding protein | PAM7971_01219 | Not Available | Positive | 1265988 - 1266488 | 19173.1 |
| hypothetical protein | PAM7971_01220 | Not Available | Positive | 1266633 - 1266932 | 9007.4 |
| 3-mercaptopyruvate sulfurtransferase | PAM7971_01221 | Not Available | Positive | 1267100 - 1267954 | 31063.2 |
| aromatic-amino-acid aminotransferase | PAM7971_01222 | Not Available | Positive | 1267954 - 1269138 | 42876.3 |
| hypothetical protein | PAM7971_01223 | Not Available | Negative | 1269195 - 1270010 | 29076.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
