Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator lutr | PAM7971_00083 | Not Available | Negative | 80489 - 81163 | 24764.8 |
| putative fad-linked oxidoreductase | PAM7971_00084 | Not Available | Positive | 81263 - 82771 | 53885.3 |
| transcriptional regulator slya | PAM7971_00085 | Not Available | Negative | 82795 - 83388 | 21792.7 |
| hypothetical protein | PAM7971_00086 | Not Available | Positive | 83503 - 84426 | 32962.6 |
| hypothetical protein | PAM7971_00087 | Not Available | Positive | 84552 - 85613 | 38616.3 |
| 30s ribosomal protein s4 | PAM7971_00088 | Not Available | Positive | 85868 - 86488 | 23471.2 |
| histidinol-phosphate aminotransferase 2 | PAM7971_00089 | Not Available | Positive | 86688 - 87776 | 39382.9 |
| t-protein | PAM7971_00090 | Not Available | Positive | 87773 - 88693 | 33131.5 |
| hypothetical protein | PAM7971_00091 | Not Available | Positive | 88690 - 89448 | 27226.4 |
| hypothetical protein | PAM7971_00092 | Not Available | Negative | 89454 - 90455 | 36133.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
