Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-reducing hydrogenase subunit hndc | PAM7971_01164 | Not Available | Positive | 1210203 - 1211720 | 53070.1 |
| putative formate dehydrogenase | PAM7971_01165 | Not Available | Positive | 1211717 - 1214623 | 105607.0 |
| formate dehydrogenase accessory protein | PAM7971_01166 | Not Available | Positive | 1214633 - 1215415 | 27504.3 |
| nadh-dependent formate dehydrogenase delta subunit fdsd | PAM7971_01167 | Not Available | Positive | 1215402 - 1215605 | 7447.92 |
| nitrite reductase | PAM7971_01168 | Not Available | Positive | 1215962 - 1218412 | 88285.0 |
| assimilatory nitrite reductase | PAM7971_01169 | Not Available | Positive | 1218409 - 1218729 | 11407.5 |
| putative formate transporter 1 | PAM7971_01170 | Not Available | Positive | 1218767 - 1219603 | 29591.0 |
| serine/threonine-protein kinase stkp | PAM7971_01171 | Not Available | Positive | 1219648 - 1221396 | 63652.8 |
| cyanate hydratase | PAM7971_01172 | Not Available | Positive | 1221422 - 1221865 | 16176.7 |
| thermostable beta-glucosidase b | PAM7971_01173 | Not Available | Positive | 1221998 - 1222327 | 11307.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
