Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine-binding periplasmic protein precursor | PAM7971_01144 | Not Available | Negative | 1188479 - 1189537 | 39168.2 |
| succinyl-diaminopimelate desuccinylase | PAM7971_01145 | Not Available | Positive | 1189803 - 1190945 | 40743.4 |
| putative n-acetyltransferase yjcf | PAM7971_01146 | Not Available | Positive | 1190942 - 1191367 | 15340.5 |
| hypothetical protein | PAM7971_01147 | Not Available | Positive | 1191382 - 1191498 | 4287.48 |
| ribonuclease r | PAM7971_01148 | Not Available | Positive | 1191638 - 1193893 | 82625.0 |
| membrane-bound lytic murein transglycosylase b precursor | PAM7971_01149 | Not Available | Positive | 1193977 - 1195242 | 45742.6 |
| rna pyrophosphohydrolase | PAM7971_01150 | Not Available | Negative | 1195267 - 1195743 | 17979.3 |
| putative ctpa-like serine protease | PAM7971_01151 | Not Available | Negative | 1195801 - 1197132 | 47445.0 |
| hypothetical protein | PAM7971_01152 | Not Available | Negative | 1197205 - 1198335 | 39802.5 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | PAM7971_01153 | Not Available | Negative | 1198332 - 1199858 | 54104.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
