Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine aminotransferase | PAM7971_01133 | Not Available | Negative | 1180453 - 1181595 | 40767.8 |
| phosphoserine phosphatase | PAM7971_01135 | Not Available | Positive | 1181840 - 1182712 | 30672.9 |
| hypothetical protein | PAM7971_01136 | Not Available | Positive | 1182713 - 1183471 | 26048.0 |
| hypothetical protein | PAM7971_01137 | Not Available | Positive | 1183653 - 1184183 | 18782.0 |
| dual-specificity rna methyltransferase rlmn | PAM7971_01138 | Not Available | Positive | 1184304 - 1185482 | 43754.7 |
| hypothetical protein | PAM7971_01139 | Not Available | Positive | 1185526 - 1185957 | 16074.3 |
| hypothetical protein | PAM7971_01140 | Not Available | Positive | 1185992 - 1186189 | 7273.91 |
| putative lysine decarboxylase | PAM7971_01141 | Not Available | Negative | 1186236 - 1187102 | 32517.8 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | PAM7971_01142 | Not Available | Positive | 1187238 - 1188065 | 29362.1 |
| hypothetical protein | PAM7971_01143 | Not Available | Positive | 1188127 - 1188477 | 12592.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
