Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yhhq | PAM7971_01123 | Not Available | Negative | 1168586 - 1169227 | 23213.8 |
| hypothetical protein | PAM7971_01124 | Not Available | Negative | 1169319 - 1170191 | 32228.3 |
| penicillin-insensitive murein endopeptidase precursor | PAM7971_01125 | Not Available | Negative | 1170164 - 1171084 | 33302.8 |
| vacuole effluxer atg22 like protein | PAM7971_01126 | Not Available | Negative | 1171084 - 1172457 | 49023.8 |
| hypothetical protein | PAM7971_01127 | Not Available | Negative | 1172526 - 1173146 | 23674.2 |
| yggt family protein | PAM7971_01128 | Not Available | Positive | 1173192 - 1173479 | 10980.2 |
| atp-dependent dna helicase recq | PAM7971_01129 | Not Available | Positive | 1173549 - 1175591 | 74164.2 |
| signal transduction histidine-protein kinase bara | PAM7971_01130 | Not Available | Negative | 1175593 - 1177785 | 81251.9 |
| bis(5'-nucleosyl)-tetraphosphatase prpe | PAM7971_01131 | Not Available | Negative | 1177919 - 1178662 | 27223.4 |
| d-3-phosphoglycerate dehydrogenase | PAM7971_01132 | Not Available | Negative | 1178760 - 1180352 | 56207.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
