Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialic acid trap transporter permease protein siat | PAM7971_01083 | Not Available | Negative | 1128168 - 1128665 | 18966.6 |
| polyol:nadp oxidoreductase | PAM7971_01084 | Not Available | Negative | 1128658 - 1130097 | 51649.7 |
| l-idonate 5-dehydrogenase (nad(p)(+)) | PAM7971_01085 | Not Available | Negative | 1130097 - 1131125 | 35891.6 |
| hth-type transcriptional regulator murr | PAM7971_01086 | Not Available | Positive | 1131252 - 1132109 | 31001.8 |
| 5-dehydro-2-deoxygluconokinase | PAM7971_01087 | Not Available | Positive | 1132119 - 1134038 | 69954.3 |
| hypothetical protein | PAM7971_01088 | Not Available | Positive | 1134215 - 1134781 | 20634.0 |
| hypothetical protein | PAM7971_01089 | Not Available | Negative | 1134647 - 1135453 | 28846.8 |
| hypothetical protein | PAM7971_01090 | Not Available | Negative | 1135491 - 1136063 | 21296.5 |
| hypothetical protein | PAM7971_01091 | Not Available | Positive | 1136330 - 1136710 | 13718.5 |
| sulfotransferase domain protein | PAM7971_01092 | Not Available | Positive | 1136738 - 1137670 | 34970.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
