Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i secretion system atp-binding protein prsd | PAM7971_01073 | Not Available | Negative | 1115374 - 1117200 | 65091.6 |
| hypothetical protein | PAM7971_01074 | Not Available | Negative | 1117242 - 1119263 | 71353.0 |
| hypothetical protein | PAM7971_01075 | Not Available | Negative | 1119445 - 1120413 | 32309.2 |
| transcriptional regulatory protein liar | PAM7971_01076 | Not Available | Positive | 1121149 - 1121928 | 28361.1 |
| hypothetical protein | PAM7971_01077 | Not Available | Positive | 1121921 - 1122436 | 19075.1 |
| hth-type transcriptional regulator cynr | PAM7971_01078 | Not Available | Positive | 1122525 - 1123550 | 37621.4 |
| dna polymerase iv | PAM7971_01079 | Not Available | Positive | 1124208 - 1125308 | 41007.5 |
| hypothetical protein | PAM7971_01080 | Not Available | Positive | 1125479 - 1125652 | 6552.98 |
| 2,3-diketo-l-gulonate-binding periplasmic protein yiao precursor | PAM7971_01081 | Not Available | Negative | 1125843 - 1126847 | 36634.6 |
| sialic acid trap transporter permease protein siat | PAM7971_01082 | Not Available | Negative | 1126871 - 1128163 | 45338.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
