Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid transport system permease protein livh | PAM7971_01063 | Not Available | Positive | 1105113 - 1106033 | 31983.3 |
| leucine/isoleucine/valine transporter permease subunit | PAM7971_01064 | Not Available | Positive | 1106045 - 1107226 | 41965.9 |
| lipopolysaccharide export system atp-binding protein lptb | PAM7971_01065 | Not Available | Positive | 1107226 - 1108002 | 28810.9 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | PAM7971_01066 | Not Available | Positive | 1107947 - 1108714 | 27931.1 |
| putative succinyl-diaminopimelate desuccinylase | PAM7971_01067 | Not Available | Positive | 1108695 - 1109861 | 41013.1 |
| glutamyl-trna(gln) amidotransferase subunit a | PAM7971_01068 | Not Available | Positive | 1109858 - 1111132 | 44831.5 |
| vibriobactin utilization protein viub | PAM7971_01069 | Not Available | Negative | 1111688 - 1112773 | 40266.9 |
| hypothetical protein | PAM7971_01070 | Not Available | Positive | 1113220 - 1113465 | 9501.38 |
| hypothetical protein | PAM7971_01071 | Not Available | Negative | 1113911 - 1114027 | 4336.39 |
| type i secretion system membrane fusion protein prse | PAM7971_01072 | Not Available | Negative | 1114034 - 1115377 | 49220.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
