Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PAM7971_01043 | Not Available | Negative | 1088556 - 1089284 | 24813.0 |
| inner membrane abc transporter permease protein ydcv | PAM7971_01044 | Not Available | Negative | 1089281 - 1090126 | 31131.6 |
| spermidine/putrescine transport system permease protein potb | PAM7971_01045 | Not Available | Negative | 1090130 - 1091050 | 33533.4 |
| sulfate/thiosulfate import atp-binding protein cysa | PAM7971_01046 | Not Available | Negative | 1091050 - 1092072 | 37244.3 |
| bacterial regulatory proteins, gntr family | PAM7971_01047 | Not Available | Positive | 1092338 - 1093348 | 37633.3 |
| hypothetical protein | PAM7971_01048 | Not Available | Negative | 1093521 - 1094165 | 23553.8 |
| hypothetical protein | PAM7971_01049 | Not Available | Positive | 1094167 - 1094634 | 17352.8 |
| hypothetical protein | PAM7971_01050 | Not Available | Positive | 1094714 - 1094899 | 6806.38 |
| site-specific tyrosine recombinase xerc | PAM7971_01051 | Not Available | Positive | 1094975 - 1095556 | 21616.9 |
| catechol-2,3-dioxygenase | PAM7971_01052 | Not Available | Negative | 1096519 - 1097406 | 32134.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
