Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ureidoglycolate lyase | PAM7971_01033 | Not Available | Negative | 1078567 - 1079418 | 30577.1 |
| hth-type transcriptional repressor csir | PAM7971_01034 | Not Available | Positive | 1079597 - 1080295 | 26843.8 |
| putative l-asparaginase | PAM7971_01035 | Not Available | Negative | 1080753 - 1081730 | 33889.5 |
| hypothetical protein | PAM7971_01036 | Not Available | Negative | 1081743 - 1082936 | 45183.4 |
| putative gtp-binding protein yjia | PAM7971_01037 | Not Available | Negative | 1082933 - 1083988 | 38480.2 |
| hypothetical protein | PAM7971_01038 | Not Available | Negative | 1083985 - 1084317 | 12297.5 |
| peptidoglycan deacetylase | PAM7971_01039 | Not Available | Negative | 1084432 - 1085310 | 33549.9 |
| spermidine/putrescine import atp-binding protein pota | PAM7971_01040 | Not Available | Negative | 1085334 - 1086404 | 38485.4 |
| hypothetical protein | PAM7971_01041 | Not Available | Negative | 1086482 - 1087705 | 44525.0 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PAM7971_01042 | Not Available | Negative | 1087776 - 1088528 | 26319.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
