Agathobacter rectalis DSM 17629

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis DSM 17629 is a Gram-positive, rod-shaped bacterium that functions as a chemoheterotroph, obtaining its energy from organic compounds. This species is nonsporulating and thrives optimally at a temperature of 37.0°C, which is indicative of its potential association with warm-blooded hosts or environments that maintain similar temperatures. A. rectalis is classified as an anaerobe, meaning it requires an oxygen-free environment for growth, thereby suggesting its adaptation to specific niches where oxygen levels are low or absent. The habitat of A. rectalis is diverse, indicating its ability to colonize and survive in various anaerobic environments. This flexibility may allow it to play a role in the complex microbial communities found in the gastrointestinal tracts of hosts. The presence of A. rectalis in such habitats could contribute to the degradation of organic matter and the fermentation processes that are essential for nutrient cycling and maintaining gut health. Given its anaerobic nature and chemoheterotrophic lifestyle, A. rectalis may be involved in the fermentation of dietary fibers, contributing to the production of short-chain fatty acids, which are important for gut health and host metabolism. This highlights A. rectalis as a potentially significant player in the gut microbiome, underscoring the importance of anaerobic bacteria in maintaining the ecological balance within various habitats.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
StrainDSM 17629

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis DSM 17629
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis DSM 17629, complete sequence.

Gene Summary

Adenine Count

993254 bp

Thymine Count

916171 bp

Guanine Count

725212 bp

Cytosine Count

624393 bp

Genome Length

3344951 bp

Protein-coding Genes

3075 genes

Non-Coding Genes

143 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lactaldehyde reductaseEUR_RS10430Not AvailablePositive2185728 - 218687340850.3
tetr/acrr family transcriptional regulator c-terminal domain-containing proteinEUR_RS10435Not AvailableNegative2186984 - 218753521716.1
type ii toxin-antitoxin system hicb family antitoxinEUR_RS10440Not AvailableNegative2187563 - 218799115853.8
type ii toxin-antitoxin system hica family toxinEUR_RS10445Not AvailableNegative2188013 - 21882047247.93
mate family efflux transporterEUR_RS10450Not AvailablePositive2188449 - 218988551865.6
cupin domain-containing proteinEUR_RS10455Not AvailableNegative2189905 - 219055523893.7
hypothetical proteinEUR_RS10460Not AvailableNegative2191744 - 21919989840.04
spova/spovaeb family sporulation membrane proteinEUR_RS10465Not AvailableNegative2192042 - 219250316487.3
serine hydroxymethyltransferaseEUR_RS10470Not AvailablePositive2192773 - 219401445168.3
serine--trna ligaseEUR_RS10475Not AvailablePositive2194070 - 219535948994.0

Displaying genes 2201 – 2210 of 3218 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.