Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | DSM 17629 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993254 bp
Thymine Count
916171 bp
Guanine Count
725212 bp
Cytosine Count
624393 bp
Genome Length
3344951 bp
Protein-coding Genes
3075 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | EUR_RS04785 | Not Available | Negative | 994048 - 995379 | 49602.8 |
| nadp-dependent malic enzyme | EUR_RS04790 | Not Available | Positive | 995659 - 996807 | 40827.3 |
| tigr01212 family radical sam protein | EUR_RS04795 | Not Available | Positive | 996809 - 997717 | 34311.5 |
| duf4364 family protein | EUR_RS04800 | Not Available | Positive | 997729 - 998244 | 19798.3 |
| flavin reductase family protein | EUR_RS04805 | Not Available | Negative | 998246 - 998815 | 20873.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EUR_RS04810 | Not Available | Negative | 998862 - 999746 | 31486.3 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | EUR_RS04815 | Not Available | Negative | 999815 - 1001287 | 54462.4 |
| diaminopimelate epimerase | EUR_RS04820 | Not Available | Negative | 1001405 - 1002262 | 31690.8 |
| arac family transcriptional regulator | EUR_RS04825 | Not Available | Positive | 1002413 - 1003249 | 32140.3 |
| putative manganese-dependent inorganic diphosphatase | EUR_RS04830 | Not Available | Negative | 1003299 - 1004948 | 61144.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

