Escherichia coli TW10509

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli TW10509 is a Gram-negative, rod-shaped bacterium commonly found in host-associated environments. This strain exhibits a cellular arrangement that includes both single cells and pairs, reflecting its typical growth patterns. E. coli TW10509 has an optimal growth temperature of 37.0°C, which aligns with the physiological temperature of many warm-blooded hosts, indicating its adaptation to a host-associated habitat. As a facultative anaerobe, E. coli TW10509 can thrive in both aerobic and anaerobic conditions, allowing it to colonize various niches within the host's microbiota. This versatility in oxygen utilization may contribute to its survival and proliferation in diverse environments, such as the intestinal tract, where oxygen levels can fluctuate. The ecological role of E. coli TW10509 may extend beyond mere commensalism; its ability to adapt to different oxygen levels and temperatures suggests it could play a significant part in the host’s microbial community dynamics, possibly influencing nutrient cycling and metabolic interactions among cohabitating microbial species. Understanding the specific traits of E. coli TW10509 can provide insights into its potential contributions to the overall health and homeostasis of its host environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainTW10509

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli TW10509
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli TW10509 cont2.92, whole genome shotgun sequence.

Gene Summary

Adenine Count

1327657 bp

Thymine Count

1330768 bp

Guanine Count

1354099 bp

Cytosine Count

1340975 bp

Genome Length

5353500 bp

Protein-coding Genes

4814 genes

Non-Coding Genes

339 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pap2 superfamily proteinERFG_02563P75806Positive2740134 - 274073022419.9
deor family protein regulatory proteinERFG_02564P0ACK7Positive2740788 - 274154628549.5
d-alanyl-d-alanine carboxypeptidaseERFG_02565P08506Negative2741593 - 274281644445.4
glutathione s-transferase domain-containing proteinERFG_02566P0ACA8Positive2743042 - 274366823739.4
glucose/sorbosone dehydrogenaseERFG_02567P75804Negative2743665 - 274478041155.9
bssr proteinERFG_02568P0AAY2Negative2744891 - 274527414536.6
miab trna modifying enzyme yligERFG_02569A7ZJQ2Positive2745487 - 274681249584.6
ggdef domain-containing proteinERFG_02570Q8X6V3Negative2746859 - 274818749901.8
eal domain-containing proteinERFG_02571P75800Negative2748195 - 275054389970.7
inner membrane transport systemERFG_02572Q8X6V6Negative2750721 - 275163233189.2

Displaying genes 2681 – 2690 of 5153 in total

Metabolites

4787 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4787 metabolites

Health Effects

No health effects information available for this bacterium.