Escherichia coli H386

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli H386 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain thrives optimally at 37.0°C, which aligns with the body temperature of many warm-blooded hosts, indicating its adaptation to a host-associated habitat. As a facultative anaerobe, E. coli H386 can grow in both aerobic and anaerobic environments, allowing it to exploit a variety of niches within its host. The capacity to switch between aerobic and anaerobic respiration is significant, as it enables E. coli H386 to adapt to fluctuating oxygen levels within different tissues or environments it encounters. This trait may facilitate its survival in diverse microenvironments within the host, contributing to its resilience and metabolic versatility. Understanding E. coli H386’s physiological traits can provide insights into its role in the microbiome of its host, potentially influencing nutrient cycling and host health. The ability to thrive in pairs or as single cells may also reflect its adaptability in colonizing different ecological niches within its host environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainH386

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli H386
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli H386 supercont1.166, whole genome shotgun

Gene Summary

Adenine Count

1308057 bp

Thymine Count

1308816 bp

Guanine Count

1335192 bp

Cytosine Count

1336812 bp

Genome Length

5342020 bp

Protein-coding Genes

5175 genes

Non-Coding Genes

337 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sec-independent protein translocase protein tatbECVG_04336Not AvailablePositive4643987 - 464450218421.8
twin arginine-targeting protein translocase tatcECVG_04337Not AvailablePositive4644505 - 464528128877.9
deoxyribonuclease tatd (dnase tatd)ECVG_04338Not AvailablePositive4645311 - 464610529555.2
transcriptional activator rfahECVG_04339Not AvailableNegative4646102 - 464659018341.3
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (polyprenylp-hydroxybenzoate decarboxylase)ECVG_04340Not AvailablePositive4646757 - 464825055606.8
nad(p)h-flavin reductaseECVG_04341Not AvailablePositive4648296 - 464899726243.5
acetyl-coa c-acyltransferase fadaECVG_04342Not AvailableNegative4649280 - 465044340878.7
fatty oxidation complex, alpha subunit fadbECVG_04343Not AvailableNegative4650453 - 465276884653.6
xaa-pro dipeptidase (x-pro dipeptidase) (prolinedipeptidase) (prolidase) (imidodipeptidase)ECVG_04344Not AvailablePositive4652832 - 465416350178.9
impact family member yigzECVG_04345Not AvailablePositive4654160 - 465477721889.3

Displaying genes 4761 – 4770 of 5512 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.