Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | YH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
434994 bp
Thymine Count
433014 bp
Guanine Count
211135 bp
Cytosine Count
203944 bp
Genome Length
1283087 bp
Protein-coding Genes
1456 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | RJP_RS03500 | Not Available | Negative | 654631 - 654906 | 10595.0 |
| trna pseudouridine(55) synthase trub | RJP_RS03505 | Not Available | Negative | 654942 - 655979 | 38788.9 |
| ntp/ndp exchange transporter tlc4 | RJP_RS03510 | Not Available | Positive | 656064 - 657599 | 57959.4 |
| sca4 family spreading effector | RJP_RS03515 | Not Available | Positive | 657891 - 660947 | 111154.0 |
| helix-turn-helix domain-containing protein | RJP_RS03520 | Not Available | Negative | 661058 - 661435 | 14410.6 |
| yihy/virulence factor brkb family protein | RJP_RS03525 | Not Available | Positive | 661955 - 662782 | 31771.1 |
| glutamine synthetase family protein | RJP_RS03530 | Not Available | Negative | 662946 - 663779 | 32095.0 |
| peptidoglycan editing factor pgef | RJP_RS03535 | Not Available | Positive | 663778 - 664500 | 26808.1 |
| peptide deformylase | RJP_RS03540 | Not Available | Positive | 664753 - 665304 | 20928.4 |
| tetratricopeptide repeat protein | RJP_RS10465 | Not Available | Negative | 665300 - 665383 | 3276.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
