Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | YH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
434994 bp
Thymine Count
433014 bp
Guanine Count
211135 bp
Cytosine Count
203944 bp
Genome Length
1283087 bp
Protein-coding Genes
1456 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpn family recombination-promoting nuclease/putative transposase | RJP_RS11305 | Not Available | Negative | 571972 - 572523 | 21724.3 |
| pd-(d/e)xk nuclease family transposase | RJP_RS11310 | Not Available | Negative | 572537 - 572680 | 5515.67 |
| diaminopimelate epimerase | RJP_RS03065 | Not Available | Positive | 572941 - 573753 | 30060.1 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | RJP_RS03070 | Not Available | Positive | 573728 - 574993 | 47649.0 |
| phenylalanine--trna ligase subunit alpha | RJP_RS03075 | Not Available | Positive | 575235 - 576284 | 40479.8 |
| phenylalanine--trna ligase subunit beta | RJP_RS03080 | Not Available | Positive | 576281 - 578737 | 90791.2 |
| dna polymerase iii subunit beta | RJP_RS03085 | Not Available | Positive | 578742 - 579881 | 42322.0 |
| duf1653 domain-containing protein | RJP_RS10425 | Not Available | Positive | 579971 - 580075 | 4137.16 |
| duf3576 domain-containing protein | RJP_RS03095 | Not Available | Positive | 580236 - 580739 | 18767.6 |
| leucine--trna ligase | RJP_RS03100 | Not Available | Positive | 580868 - 583375 | 96651.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
