Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Rickettsia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Rickettsia |
| Species | Rickettsia japonica |
| Strain | YH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
434994 bp
Thymine Count
433014 bp
Guanine Count
211135 bp
Cytosine Count
203944 bp
Genome Length
1283087 bp
Protein-coding Genes
1456 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | RJP_RS01110 | Not Available | Negative | 218384 - 219457 | 39255.9 |
| transcription antitermination factor nusb | RJP_RS01115 | Not Available | Positive | 219738 - 220208 | 17779.5 |
| rlme family rna methyltransferase | RJP_RS01120 | Not Available | Positive | 220344 - 221027 | 25757.1 |
| hypothetical protein | RJP_RS01125 | Not Available | Negative | 221090 - 222151 | 39538.1 |
| hypothetical protein | RJP_RS01130 | Not Available | Positive | 222325 - 223269 | 34918.1 |
| type ii toxin-antitoxin system rata family toxin | RJP_RS01135 | Not Available | Negative | 223328 - 223768 | 17074.8 |
| duf1674 domain-containing protein | RJP_RS01140 | Not Available | Negative | 223768 - 224049 | 10533.2 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | RJP_RS01145 | Not Available | Positive | 224062 - 224793 | 27337.3 |
| duf378 domain-containing protein | RJP_RS01150 | Not Available | Negative | 224882 - 225118 | 8607.03 |
| efflux rnd transporter permease subunit | RJP_RS01155 | Not Available | Negative | 225366 - 228392 | 111736.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
