Grimontia marina

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Grimontia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusGrimontia
SpeciesGrimontia marina
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Grimontia marina strain CECT 8713 genome assembly, contig: 0294,

Gene Summary

Adenine Count

1478829 bp

Thymine Count

1471738 bp

Guanine Count

1367230 bp

Cytosine Count

1372906 bp

Genome Length

5690703 bp

Protein-coding Genes

5040 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
toxin rele2GMA8713_02901Not AvailablePositive3187690 - 318799211533.9
23s rrna (guanine(745)-n(1))-methyltransferaseGMA8713_02902P36999Positive3188110 - 318893431002.9
hypothetical proteinGMA8713_02903Not AvailableNegative3189064 - 319160193660.4
toxin rtx-i translocation atp-binding proteinGMA8713_02904Q9EXN5Negative3192760 - 319486578690.6
colicin v secretion protein cvaaGMA8713_02905P16534Negative3194867 - 319610546897.0
rimk-like atp-grasp domain proteinGMA8713_02906Not AvailableNegative3196175 - 319716137516.0
hypothetical proteinGMA8713_02907Not AvailableNegative3197184 - 319820638626.4
hypothetical proteinGMA8713_02908Not AvailableNegative3198350 - 31985537352.31
diaminobutyrate--2-oxoglutarate aminotransferaseGMA8713_02909Q9Z3R2Positive3199437 - 3202337105461.0
carboxynorspermidine synthaseGMA8713_02910P0DPE4Positive3202384 - 320362845856.3

Displaying genes 2931 – 2940 of 5249 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

262 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da

Displaying 1–10 of 262 metabolites

Health Effects

No health effects information available for this bacterium.