Clostridium sp. DL-VIII

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. DL-VIII
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatactivated anaerobic sludge
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. DL-VIII chromosome, whole genome shotgun sequence.

Gene Summary

Adenine Count

2284371 bp

Thymine Count

2243225 bp

Guanine Count

994426 bp

Cytosine Count

955235 bp

Genome Length

6477357 bp

Protein-coding Genes

5892 genes

Non-Coding Genes

196 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal phosphate-dependent aminotransferaseCDLVIII_RS11105Not AvailablePositive2430513 - 243155039779.2
imidazoleglycerol-phosphate dehydratase hisbCDLVIII_RS11110Not AvailablePositive2431595 - 243218221907.3
imidazole glycerol phosphate synthase subunit hishCDLVIII_RS11115Not AvailablePositive2432225 - 243284523088.1
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseCDLVIII_RS11120Not AvailablePositive2432842 - 243357026726.4
imidazole glycerol phosphate synthase subunit hisfCDLVIII_RS11125Not AvailablePositive2433756 - 243451727616.3
phosphoribosyl-amp cyclohydrolaseCDLVIII_RS11130Not AvailablePositive2434567 - 243489612437.8
phosphoribosyl-atp diphosphataseCDLVIII_RS11135Not AvailablePositive2435093 - 243541912394.9
hypothetical proteinCDLVIII_RS11140Not AvailablePositive2435995 - 24361897319.85
hypothetical proteinCDLVIII_RS11145Not AvailablePositive2436314 - 243712330326.6
trigger factorCDLVIII_RS11150Not AvailablePositive2437219 - 243850248439.7

Displaying genes 2351 – 2360 of 6088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.