Cardiobacterium hominis ATCC 15826

Rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cardiobacteriales

Family

Cardiobacteriaceae

Genus

Cardiobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCardiobacteriales
FamilyCardiobacteriaceae
GenusCardiobacterium
SpeciesCardiobacterium hominis
StrainATCC 15826

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cardiobacterium hominis ATCC 15826 contig00256, whole genome

Gene Summary

Adenine Count

526827 bp

Thymine Count

522169 bp

Guanine Count

774096 bp

Cytosine Count

755804 bp

Genome Length

2578897 bp

Protein-coding Genes

2518 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative membrane proteinHMPREF0198_2005P44170Negative1996270 - 199713330821.7
endonuclease/exonuclease/phosphatase family proteinHMPREF0198_2006Not AvailableNegative1997267 - 199798626604.2
phospholipase d domain proteinHMPREF0198_2007B2VKV4Positive1998071 - 199953153738.5
hypothetical proteinHMPREF0198_2008Not AvailableNegative1999754 - 200146061563.5
pseudouridine synthase, rlua familyHMPREF0198_2009Q8ZIK1Negative2001512 - 200212922965.4
hypothetical proteinHMPREF0198_2010Not AvailableNegative2002202 - 200291225647.8
hypothetical proteinHMPREF0198_2011Not AvailableNegative2003147 - 20032784727.71
thif family proteinHMPREF0198_2012O32037Negative2003536 - 200427926252.9
hydrolase, tatd familyHMPREF0198_2013P39408Negative2004287 - 200503626890.6
tetratricopeptide repeat proteinHMPREF0198_2014Not AvailableNegative2005103 - 200568420544.1

Displaying genes 2081 – 2090 of 2637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

112 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001200beta-maltoseC12H22O11Chemical structure of beta-maltoseNot available
Average342.2965Da
Monoisotopic342.1162115Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da

Displaying 1–10 of 112 metabolites

Health Effects

No health effects information available for this bacterium.