Erwinia billingiae Eb661

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Erwinia

Description

The genus Erwinia currently contains both plant pathogenic and nonpathogenic bacteria. The nonpathogenic Erwinia billingiae strain Eb661 is an epiphyte isolated from a pear tree in England in 1959 and is also known as LMG 2613. Epiphytic Erwinia strains can compete with growth and distribution of E. amylovora on flowers and may be applied as antagonists for control of fire blight, a devastating bacterial infection of apple, pear and related trees. Comparisons of the pathogenic Erwinia pyrifoliae strain Ep1/96 with this and another non pathogen Erwinia tasmaniensis Et1/99 indicates E.billingiae has just over 2000 unique genes compared to 600-900 for each of the other species. Some of these components probably represent factors to describe pathogenic and non-pathogenic Erwinia species (adapted from PMID 20565991). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusErwinia
SpeciesErwinia billingiae
Strain661

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Erwinia billingiae Eb661
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Erwinia billingiae Eb661 plasmid pEB170, complete sequence.

Gene Summary

Adenine Count

40796 bp

Thymine Count

40122 bp

Guanine Count

45071 bp

Cytosine Count

43789 bp

Genome Length

169778 bp

Protein-coding Genes

160 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseEBC_RS03785Not AvailablePositive533887 - 53541053223.8
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeEBC_RS03790Not AvailablePositive535407 - 53588317146.6
n-acetylmuramoyl-l-alanine amidase amibEBC_RS03795Not AvailablePositive535892 - 53754758838.4
dna mismatch repair endonuclease mutlEBC_RS03800Not AvailablePositive537565 - 53944869325.7
trna (adenosine(37)-n6)-dimethylallyltransferase miaaEBC_RS03805Not AvailablePositive539441 - 54039135338.3
rna chaperone hfqEBC_RS03810Not AvailablePositive540494 - 54080211176.0
ribosome rescue gtpase hflxEBC_RS03815Not AvailablePositive541012 - 54229247897.4
ftsh protease activity modulator hflkEBC_RS03820Not AvailablePositive542363 - 54361345861.6
protease modulator hflcEBC_RS03825Not AvailablePositive543617 - 54462137309.3
duf2065 domain-containing proteinEBC_RS03830Not AvailablePositive544689 - 5448897212.3

Displaying genes 781 – 790 of 4990 in total

Metabolites

1797 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da

Displaying 1–10 of 1797 metabolites

Health Effects

No health effects information available for this bacterium.