Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii transcriptional regulator hrpr | PLA106_04177 | P37930 | Negative | 941236 - 942084 | 31174.0 |
| membrane-bound lytic murein transglycosylase d | PLA106_04182 | P0AEZ8 | Negative | 943258 - 944745 | 54153.8 |
| type iii effector protein avre1 | PLA106_04187 | Not Available | Positive | 945092 - 950353 | 190571.0 |
| type iii chaperone shce | PLA106_04192 | Not Available | Negative | 950402 - 950791 | 14340.1 |
| effector protein hopm1 | PLA106_04197 | Q887D0 | Negative | 950870 - 953008 | 75218.5 |
| type iii chaperone shcm | PLA106_04202 | Not Available | Negative | 953005 - 953529 | 19094.8 |
| type iii helper protein hrpw1 | PLA106_04207 | D3JTC1 | Positive | 953805 - 955079 | 42913.1 |
| type iii effector hopaa1-1 | PLA106_04212 | Not Available | Negative | 955163 - 956623 | 50653.0 |
| conserved effector locus protein | PLA106_04217 | Q98E66 | Positive | 956995 - 957939 | 35378.1 |
| type iii effector hopn1 | PLA106_04222 | Not Available | Negative | 957976 - 959028 | 38556.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
