Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion cytoplasmic atpase hrcn | PLA106_04077 | Q887B5 | Positive | 926325 - 927674 | 48370.5 |
| type iii secretion protein hrpo | PLA106_04082 | Not Available | Positive | 927674 - 928123 | 17654.8 |
| type iii secretion protein hrpp | PLA106_04087 | Not Available | Positive | 928130 - 928699 | 20105.0 |
| type iii secretion protein hrcqa | PLA106_04092 | Q887B7 | Positive | 928696 - 929412 | 25991.2 |
| type iii secretion protein hrcqb | PLA106_04097 | Q9F0H3 | Positive | 929402 - 929815 | 15268.1 |
| type iii secretion system protein yscr | PLA106_04102 | Q60236 | Positive | 929812 - 930465 | 24131.5 |
| type iii secretion protein hrcs | PLA106_04107 | P69982 | Positive | 930473 - 930739 | 9424.15 |
| type iii secretion protein spar/ysct/hrct | PLA106_04112 | Not Available | Positive | 930740 - 931534 | 28284.8 |
| type iii secretion protein hrcu | PLA106_04117 | P69986 | Positive | 931531 - 932610 | 39866.4 |
| type iii secretion protein hrpt | PLA106_04122 | Not Available | Negative | 933280 - 933483 | 7674.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
