Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLA106_04027 | Not Available | Positive | 913816 - 914040 | 8306.88 |
| phage integrase:phage integrase, n-terminal sam-like protein | PLA106_04032 | Not Available | Positive | 914829 - 915071 | 8678.59 |
| hypothetical protein | PLA106_04037 | Not Available | Negative | 915505 - 916350 | 31132.5 |
| hypothetical protein | PLA106_04042 | Not Available | Negative | 916534 - 916650 | 3473.2 |
| type iii effector hopb1 | PLA106_04047 | Not Available | Negative | 917425 - 918678 | 45444.4 |
| type iii helper protein hrpk1 | PLA106_04052 | P41501 | Negative | 918900 - 921224 | 80481.4 |
| rna polymerase sigma factor hrpl | PLA106_04057 | P37929 | Negative | 921311 - 921865 | 21193.4 |
| type iii secretion protein hrpj | PLA106_04062 | Q05395 | Positive | 922109 - 923215 | 40716.8 |
| type iii secretion protein hrcv | PLA106_04067 | P35655 | Positive | 923215 - 925302 | 76347.6 |
| type iii secretion apparatus protein, yscd/hrpq family | PLA106_04072 | Not Available | Positive | 925336 - 926328 | 35933.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
