Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii effector hopu1 | PLA106_03877 | Not Available | Negative | 886739 - 887023 | 10361.3 |
| type iii chaperone protein shcf | PLA106_03882 | Not Available | Positive | 887024 - 887182 | 6053.62 |
| type iii effector hopf2 | PLA106_03887 | Not Available | Positive | 887499 - 887933 | 15837.8 |
| hypothetical protein | PLA106_03892 | Not Available | Negative | 888357 - 888587 | 9076.56 |
| type iii chaperone protein shcf | PLA106_03897 | Not Available | Negative | 888692 - 888926 | 9127.7 |
| ispsy5, transposase | PLA106_03902 | Not Available | Negative | 889008 - 889541 | 20002.1 |
| hypothetical protein | PLA106_03907 | Not Available | Positive | 889542 - 889679 | 5091.9 |
| isppu13, transposase orf1 | PLA106_03912 | Not Available | Negative | 889770 - 890036 | 10096.7 |
| ggdef domain protein | PLA106_03917 | Q9KKZ4 | Positive | 890356 - 891630 | 47539.9 |
| acyl-coa dehydrogenase domain-containing protein | PLA106_03922 | Q5LLW7 | Positive | 891800 - 893545 | 62654.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
