Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLA106_00005 | Not Available | Negative | 1 - 154 | 5747.65 |
| hypothetical protein | PLA106_00010 | Not Available | Positive | 166 - 557 | 15315.7 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 255 - 1795 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 308 - 3211 | Not Available |
| transcriptional regulator, luxr family protein | PLA106_00025 | Not Available | Positive | 1966 - 2634 | 24547.3 |
| syringolide efflux protein syfd | PLA106_00030 | Q881Q1 | Negative | 2640 - 4646 | 72426.0 |
| syringolide efflux protein syfc | PLA106_00035 | P64176 | Negative | 4649 - 5800 | 41397.4 |
| non-ribosomal peptide synthetase syfb | PLA106_00040 | Not Available | Negative | 5797 - 8748 | 106524.0 |
| non-ribosomal peptide synthetase syfb | PLA106_00045 | Not Available | Negative | 8749 - 11169 | 87828.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 15061 - 15176 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
