Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain protein | PLA106_02680 | Not Available | Negative | 623603 - 623859 | 9658.45 |
| hypothetical protein | PLA106_02685 | Not Available | Negative | 623901 - 624446 | 20318.6 |
| d-galactose 1-dehydrogenase | PLA106_02690 | P11886 | Positive | 625123 - 626049 | 33565.9 |
| hypothetical protein | PLA106_02695 | Q325C0 | Positive | 626082 - 627095 | 37085.5 |
| hypothetical protein | PLA106_02700 | Not Available | Negative | 627103 - 627642 | 19653.3 |
| hypothetical protein | PLA106_02705 | P54471 | Negative | 627762 - 628457 | 25814.2 |
| endoribonuclease l-psp family protein | PLA106_02710 | Q9UR06 | Positive | 628625 - 629008 | 13610.2 |
| glutathione s-transferase family protein | PLA106_02715 | Not Available | Positive | 629058 - 629681 | 23500.7 |
| type iii effector hopi1 | PLA106_02720 | Not Available | Positive | 630061 - 631527 | 52552.8 |
| transcriptional regulator, gntr family/aminotransferase, class i | PLA106_02725 | H3ZPL1 | Negative | 631626 - 632966 | 49773.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
