Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | PLA106_28156 | Not Available | Positive | 5853781 - 5854241 | 16996.9 |
| ggdef domain/eal domain protein | PLA106_28161 | Not Available | Negative | 5854242 - 5854702 | 16692.0 |
| ggdef domain/eal domain protein | PLA106_28166 | Not Available | Negative | 5854703 - 5855161 | 16712.8 |
| sigma-54 dependent transcriptional regulator, putative | PLA106_28171 | Q3K999 | Positive | 5855615 - 5855991 | 14374.2 |
| tail protein d | PLA106_28176 | Not Available | Negative | 5856059 - 5856501 | 16408.2 |
| pyoverdine sidechain peptide synthetase iii, l-thr-l-ser component | PLA106_28181 | Not Available | Positive | 5856502 - 5856942 | 15970.2 |
| acrb/acrd/acrf family protein | PLA106_28186 | Not Available | Negative | 5857049 - 5857383 | 12326.8 |
| hypothetical protein | PLA106_28191 | Not Available | Negative | 5857384 - 5857500 | 4640.62 |
| ispsy5, transposase | PLA106_28196 | Not Available | Positive | 5857599 - 5857820 | 8545.03 |
| outer membrane porin, oprd family protein | PLA106_28201 | Not Available | Negative | 5857821 - 5858255 | 15970.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
