Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLA106_27926 | Not Available | Positive | 5832728 - 5832902 | 6101.46 |
| type vi secretion system vgr family protein | PLA106_27931 | Q9I0F3 | Negative | 5832903 - 5833275 | 13380.5 |
| hypothetical protein | PLA106_27936 | Not Available | Positive | 5833410 - 5833592 | 6643.06 |
| non-ribosomal peptide synthetase syfb | PLA106_27951 | Not Available | Positive | 5834379 - 5835089 | 26185.2 |
| site-specific recombinase, phage integrase family protein | PLA106_27956 | Not Available | Negative | 5835138 - 5835796 | 23972.0 |
| ispsy5, transposase | PLA106_27961 | Not Available | Negative | 5835797 - 5836333 | 20110.4 |
| ispsy5, orf1 | PLA106_27966 | Not Available | Negative | 5836351 - 5836497 | 5642.66 |
| pyoverdine sidechain peptide synthetase iii, l-thr-l-ser component | PLA106_27971 | D9XF49 | Positive | 5836498 - 5837190 | 25400.3 |
| isps1, transposase orfa | PLA106_27976 | Not Available | Positive | 5837872 - 5838213 | 13078.6 |
| isps1, transposase orfb | PLA106_27981 | Not Available | Positive | 5838261 - 5838551 | 11248.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
