Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii effector hopo1-2 | PLA106_27186 | Not Available | Negative | 5690213 - 5690503 | 10637.4 |
| hypothetical protein | PLA106_27191 | Not Available | Positive | 5690522 - 5690695 | 6541.29 |
| hypothetical protein | PLA106_27196 | Not Available | Negative | 5690730 - 5690948 | 7960.49 |
| bacterial transferase, hexapeptide repeat protein | PLA106_27201 | P40882 | Negative | 5690948 - 5691472 | 18466.2 |
| mutt/nudix family protein | PLA106_27206 | Q8GYB1 | Negative | 5691531 - 5691989 | 17132.4 |
| mutt/nudix family protein | PLA106_27211 | P93740 | Positive | 5692279 - 5692830 | 20758.8 |
| hypothetical protein | PLA106_27216 | Not Available | Positive | 5692890 - 5693453 | 21420.8 |
| hypothetical protein | PLA106_27221 | Not Available | Negative | 5693591 - 5693902 | 11434.6 |
| phosphoribosylformylglycinamidine synthase | PLA106_27226 | Q886W6 | Negative | 5693908 - 5697804 | 140669.0 |
| membrane-bound lytic transglycosylase f | PLA106_27231 | Q886W7 | Positive | 5698083 - 5699510 | 53184.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
