Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen abc transporter, permease protein, putative | PLA106_26414 | Not Available | Negative | 5522976 - 5523722 | 27453.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | PLA106_26419 | Q9HU21 | Negative | 5523803 - 5524348 | 20485.1 |
| hypothetical protein | PLA106_26424 | Not Available | Positive | 5524433 - 5524624 | 6735.01 |
| lipopolysaccharide biosynthesis protein | PLA106_26429 | Not Available | Negative | 5525021 - 5525950 | 34712.3 |
| glucose-1-phosphate thymidylyltransferase | PLA106_26434 | P61887 | Negative | 5525992 - 5526882 | 32785.1 |
| dtdp-4-dehydrorhamnose reductase | PLA106_26439 | P37760 | Negative | 5526879 - 5527784 | 32761.1 |
| dtdp-glucose 4,6-dehydratase | PLA106_26444 | P37777 | Negative | 5527784 - 5528857 | 40362.1 |
| hypothetical protein | PLA106_26449 | Not Available | Positive | 5529427 - 5529645 | 8142.7 |
| hypothetical protein | PLA106_26454 | Not Available | Positive | 5530109 - 5530789 | 26395.6 |
| modification methyltransferase | PLA106_26459 | P25240 | Positive | 5531867 - 5533501 | 60947.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
