Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative monovalent cation/h+ antiporter subunit d | PLA106_25760 | Q52981 | Negative | 5385961 - 5387646 | 59990.7 |
| putative monovalent cation/h+ antiporter subunit c | PLA106_25765 | Q52980 | Negative | 5387643 - 5387987 | 12274.4 |
| putative monovalent cation/h+ antiporter subunit a | PLA106_25770 | Q52978 | Negative | 5387987 - 5390905 | 105747.0 |
| hypothetical protein | PLA106_25775 | Not Available | Negative | 5391065 - 5392003 | 32856.4 |
| dna-binding protein | PLA106_25780 | Not Available | Positive | 5392125 - 5392694 | 20975.8 |
| hypothetical protein | PLA106_25785 | Not Available | Positive | 5392743 - 5394146 | 51035.0 |
| sigma-54 dependent transcriptional regulator, putative | PLA106_25790 | Not Available | Negative | 5394219 - 5394922 | 25856.2 |
| alkanesulfonate monooxygenase | PLA106_25795 | Q87ZG3 | Negative | 5394922 - 5396061 | 41593.4 |
| ku domain protein | PLA106_25800 | Q87ZG4 | Positive | 5396462 - 5397355 | 33328.0 |
| atp-dependent dna ligase | PLA106_25805 | Q9I1X7 | Positive | 5397392 - 5399947 | 94286.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
