Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLA106_25093 | A1JNH0 | Negative | 5260737 - 5261198 | 16870.3 |
| hypothetical protein | PLA106_25098 | Q7N4I0 | Negative | 5261195 - 5261644 | 16864.2 |
| response regulator | PLA106_25103 | P14375 | Positive | 5261935 - 5262939 | 35739.6 |
| sensory box protein | PLA106_25108 | Not Available | Positive | 5262943 - 5263425 | 18410.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | PLA106_25113 | Q888I3 | Positive | 5263521 - 5264777 | 43686.3 |
| transcriptional activator chrr | PLA106_25118 | Not Available | Negative | 5264800 - 5265462 | 24237.6 |
| rna polymerase sigma factor rpoe | PLA106_25123 | Q3IYV6 | Negative | 5265462 - 5265944 | 18773.5 |
| hypothetical protein | PLA106_25128 | Not Available | Negative | 5266484 - 5266663 | 6590.91 |
| virulence-associated protein, putative | PLA106_25133 | O06662 | Negative | 5267058 - 5267462 | 14859.0 |
| virulence-associated protein, putative | PLA106_25138 | O06663 | Negative | 5267462 - 5267692 | 8594.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
