Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensory box/ggdef domain/eal domain protein | PLA106_22923 | Not Available | Positive | 4781598 - 4785350 | 142108.0 |
| type iii effector hopae1 | PLA106_22928 | Q7PC62 | Negative | 4785465 - 4788233 | 97499.4 |
| serine hydroxymethyltransferase | PLA106_22933 | Q87WC1 | Positive | 4788521 - 4789774 | 44846.5 |
| glucosyl hydrolase family protein | PLA106_22938 | P25310 | Negative | 4789989 - 4790606 | 22890.6 |
| type iii effector hopaw1 | PLA106_22943 | Not Available | Positive | 4790780 - 4791436 | 24568.0 |
| stability/partitioning determinant | PLA106_22948 | Q52563 | Negative | 4791614 - 4791718 | 3816.5 |
| hypothetical protein | PLA106_22953 | Not Available | Positive | 4791833 - 4792072 | 8748.62 |
| type iii effector hope1 | PLA106_22958 | Not Available | Positive | 4792275 - 4792802 | 20163.0 |
| cobalamin synthesis protein/p47k family protein | PLA106_22963 | P24203 | Negative | 4793564 - 4794541 | 35931.4 |
| hypothetical protein | PLA106_22968 | P0AAT0 | Negative | 4794637 - 4794834 | 7597.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
