Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs element vgr protein | PLA106_22873 | Q9I6M7 | Negative | 4771461 - 4774019 | 93624.1 |
| type iii effector hopo1-3 | PLA106_22878 | Not Available | Negative | 4774081 - 4774212 | 4783.82 |
| type iii effector hopt1-2 | PLA106_22883 | Not Available | Negative | 4774853 - 4776022 | 42073.8 |
| type iii effector hopo1-2 | PLA106_22888 | Not Available | Negative | 4776028 - 4776636 | 22966.0 |
| hypothetical protein | PLA106_22893 | Not Available | Negative | 4776981 - 4777838 | 32085.2 |
| type iii chaperone shcs1 | PLA106_22898 | Not Available | Negative | 4777851 - 4778324 | 17201.5 |
| lipoprotein, putative | PLA106_22903 | Not Available | Positive | 4778523 - 4778876 | 13261.3 |
| transcription elongation factor greb | PLA106_22908 | P64276 | Positive | 4778953 - 4779450 | 18081.0 |
| putative abc transporter atp-binding protein | PLA106_22913 | Not Available | Negative | 4779503 - 4780585 | 40227.3 |
| putative abc transporter atp-binding protein | PLA106_22918 | P45127 | Negative | 4780586 - 4781132 | 19959.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
