Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase/response regulator | PLA106_22413 | P0C0F7 | Negative | 4679055 - 4680668 | 59350.7 |
| dna-binding response regulator, luxr family protein | PLA106_22418 | A8R3T0 | Positive | 4680942 - 4681565 | 22533.4 |
| sensor histidine kinase/response regulator | PLA106_22423 | Q2T0V9 | Positive | 4681975 - 4683597 | 59484.1 |
| hypothetical protein | PLA106_22428 | Not Available | Positive | 4683825 - 4684331 | 17914.0 |
| lipoprotein, putative | PLA106_22433 | Not Available | Negative | 4684456 - 4684956 | 18153.8 |
| outer membrane protein p1, putative | PLA106_22438 | Not Available | Negative | 4685136 - 4686404 | 44908.3 |
| type iii effector hopag1 | PLA106_22443 | Not Available | Positive | 4686541 - 4688220 | 61320.2 |
| type iii effector hopah1 | PLA106_22448 | Not Available | Positive | 4688830 - 4689597 | 26488.8 |
| type iii effector phosphothreonine lyase | PLA106_22453 | Q8VSP9 | Positive | 4689768 - 4690571 | 29542.7 |
| hypothetical protein | PLA106_22458 | Not Available | Positive | 4690961 - 4691950 | 36738.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
