Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein phosphodiesterase, putative | PLA106_22263 | Q87UC3 | Negative | 4639933 - 4640562 | 22888.5 |
| biotin carboxylase/biotin carboxyl carrier protein | PLA106_22268 | P96890 | Negative | 4640981 - 4642720 | 61827.7 |
| allophanate hydrolase, putative | PLA106_22273 | Not Available | Negative | 4642717 - 4644336 | 57015.6 |
| hypothetical protein | PLA106_22278 | Q87UC6 | Negative | 4644346 - 4645152 | 28938.4 |
| lamb/ycsf family protein | PLA106_22283 | Q87UC7 | Negative | 4645149 - 4645919 | 27034.4 |
| hypothetical protein | PLA106_22288 | P42964 | Negative | 4645954 - 4647123 | 40481.8 |
| transcriptional regulator, gntr family protein | PLA106_22293 | Not Available | Positive | 4647509 - 4648108 | 22269.9 |
| hypothetical protein | PLA106_22298 | Not Available | Negative | 4648259 - 4648624 | 13150.7 |
| type iii effector hopq1-1 | PLA106_22303 | Not Available | Negative | 4648964 - 4650187 | 44398.1 |
| hypothetical protein | PLA106_22308 | F1ND48 | Negative | 4650519 - 4651976 | 55263.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
