Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxygalactonate kinase | PLA106_21503 | Q92RN7 | Negative | 4479674 - 4480678 | 35746.0 |
| aspartate-semialdehyde dehydrogenase | PLA106_21508 | Q51344 | Negative | 4480844 - 4481956 | 40401.0 |
| 3-isopropylmalate dehydrogenase | PLA106_21513 | Q884C0 | Negative | 4482027 - 4483109 | 38755.9 |
| isopropylmalate isomerase small subunit | PLA106_21518 | Q884C1 | Negative | 4483256 - 4483897 | 24009.3 |
| isopropylmalate isomerase large subunit | PLA106_21523 | Q884C2 | Negative | 4483894 - 4485321 | 51050.1 |
| transcriptional regulator, lysr family protein | PLA106_21528 | P96194 | Positive | 4485467 - 4486339 | 31929.0 |
| sensory box/ggdef domain/eal domain protein | PLA106_21533 | Not Available | Positive | 4486408 - 4487272 | 32493.4 |
| sensory box/ggdef domain/eal domain protein | PLA106_21538 | Not Available | Positive | 4487274 - 4488563 | 48041.9 |
| heat shock protein hsp20 | PLA106_21543 | P96193 | Negative | 4488619 - 4489062 | 16590.6 |
| trna-dihydrouridine synthase c | PLA106_21548 | Q884C6 | Negative | 4489193 - 4490146 | 35122.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
