Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactarate dehydratase | PLA106_20583 | P42240 | Negative | 4286956 - 4288509 | 56148.9 |
| mfs transporter, phthalate permease family protein | PLA106_20588 | P42237 | Negative | 4288520 - 4289905 | 50048.7 |
| 5-dehydro-4-deoxyglucarate dehydratase | PLA106_20593 | Q87WJ7 | Negative | 4290071 - 4290982 | 32714.3 |
| transcriptional regulator, gntr family protein | PLA106_20598 | P42239 | Negative | 4291162 - 4291848 | 25388.9 |
| abc transporter, atp-binding protein | PLA106_20603 | Q57335 | Negative | 4292009 - 4293742 | 65499.7 |
| dna-binding response regulator | PLA106_20608 | O82868 | Negative | 4293832 - 4294395 | 20717.9 |
| sensor histidine kinase | PLA106_20613 | P0C0Z0 | Negative | 4294392 - 4295651 | 46461.6 |
| hypothetical protein | PLA106_20618 | Not Available | Positive | 4295845 - 4296558 | 25676.7 |
| phca | PLA106_20623 | Not Available | Positive | 4296766 - 4298322 | 57887.1 |
| peptide abc transporter, periplasmic peptide-binding protein | PLA106_20628 | Not Available | Positive | 4298419 - 4299364 | 35070.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
