Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate 5-dehydrogenase | PLA106_16659 | A4XNB9 | Negative | 3484345 - 3485169 | 29254.9 |
| coproporphyrinogen iii oxidase | PLA106_16664 | Q88B49 | Negative | 3485169 - 3486083 | 34503.2 |
| hypothetical protein | PLA106_16669 | Not Available | Positive | 3486387 - 3487009 | 22307.7 |
| hypothetical protein | PLA106_16674 | B0KTG9 | Positive | 3487010 - 3487620 | 23010.3 |
| hypothetical protein | PLA106_16679 | Not Available | Positive | 3487620 - 3487940 | 11462.6 |
| quinone oxidoreductase | PLA106_16684 | P43903 | Positive | 3488036 - 3489013 | 34317.1 |
| sua5/ycio/yrdc domain-containing protein | PLA106_16689 | Q48QH8 | Negative | 3489021 - 3489578 | 20536.7 |
| dna processing protein dpra, putative | PLA106_16694 | P30852 | Negative | 3489617 - 3490732 | 38958.8 |
| lysm domain protein | PLA106_16699 | Not Available | Negative | 3490856 - 3491881 | 37602.1 |
| peptide deformylase | PLA106_16704 | Q88B43 | Positive | 3492007 - 3492513 | 19186.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
