Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding/permease protein | PLA106_01280 | P63392 | Positive | 289526 - 291271 | 63766.3 |
| yersiniabactin non-ribosomal peptide synthetase | PLA106_01285 | P48633 | Positive | 291332 - 297505 | 228322.0 |
| hypothetical protein | PLA106_01290 | Not Available | Positive | 297502 - 298728 | 44323.3 |
| yersiniabactin polyketide/non-ribosomal peptide synthetase | PLA106_01295 | Q7TXL6 | Positive | 298715 - 308230 | 348120.0 |
| yersiniabactin synthetase, thioesterase component | PLA106_01310 | Not Available | Positive | 309325 - 310095 | 28453.2 |
| yersiniabactin synthetase, salicylate ligase component | PLA106_01315 | P40871 | Positive | 310108 - 311676 | 56187.3 |
| isochorismate-pyruvate lyase | PLA106_01320 | Q51507 | Positive | 311692 - 312012 | 12334.7 |
| salicylate biosynthesis isochorismate synthase | PLA106_01325 | Q51508 | Positive | 312009 - 313418 | 51203.2 |
| transcriptional regulatory protein nfxb | PLA106_01330 | P32265 | Negative | 313455 - 314081 | 23033.0 |
| multidrug resistance protein, acra/acre family | PLA106_01335 | P0AE07 | Positive | 314199 - 315350 | 40593.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
