Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative head completion/stabilization protein | PLA106_13969 | Not Available | Negative | 2971000 - 2971461 | 16861.1 |
| hypothetical protein | PLA106_13974 | Not Available | Positive | 2971497 - 2971793 | 11105.6 |
| Putative terminase endonuclease subunit | PLA106_13979 | Not Available | Negative | 2971933 - 2972661 | 27367.6 |
| Major capsid protein | PLA106_13984 | P25477 | Negative | 2972658 - 2973680 | 37441.2 |
| Gpo family capsid scaffolding protein | PLA106_13989 | P51719 | Negative | 2973682 - 2974605 | 33237.4 |
| Putative terminase atpase subunit | PLA106_13994 | P51718 | Positive | 2974767 - 2976821 | 77757.7 |
| Portal protein | PLA106_13999 | P51717 | Positive | 2976748 - 2977599 | 31675.7 |
| Hypothetical protein | PLA106_14004 | Not Available | Positive | 2977747 - 2977935 | 7196.8 |
| hypothetical protein | PLA106_14009 | Not Available | Negative | 2978005 - 2978181 | 6981.38 |
| Helix-turn-helix transcriptional regulator | PLA106_14014 | Not Available | Negative | 2978281 - 2978628 | 12733.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
