Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLA106_13769 | Not Available | Positive | 2938866 - 2939000 | 4900.87 |
| pilus retraction motor protein pilt | PLA106_13774 | Not Available | Positive | 2938991 - 2939239 | 8897.74 |
| lipoprotein, putative | PLA106_13779 | Not Available | Positive | 2939394 - 2939672 | 9868.5 |
| methyl-accepting chemotaxis protein | PLA106_13784 | Not Available | Positive | 2939989 - 2941335 | 48925.2 |
| type iii chaperone protein shca | PLA106_13789 | Not Available | Positive | 2941504 - 2941887 | 14352.4 |
| type iii effector hopa1 | PLA106_13794 | Q08370 | Positive | 2941932 - 2943074 | 42007.9 |
| hypothetical protein | PLA106_13799 | Not Available | Positive | 2943198 - 2943683 | 18186.5 |
| gaba permease | PLA106_13804 | Q9I703 | Negative | 2943731 - 2944278 | 19307.2 |
| gaba permease | PLA106_13809 | Not Available | Negative | 2944279 - 2945037 | 27137.5 |
| amino acid abc transporter, atp-binding protein | PLA106_13814 | Not Available | Positive | 2945622 - 2946395 | 28377.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
