Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylthioribose-1-phosphate isomerase | PLA106_12395 | Q885T7 | Positive | 2677433 - 2678509 | 38983.9 |
| dna gyrase subunit a | PLA106_12400 | P48372 | Positive | 2678812 - 2681598 | 102573.0 |
| 3-phosphoserine/phosphohydroxythreonine aminotransferase | PLA106_12405 | Q885T5 | Positive | 2681784 - 2682869 | 39654.1 |
| chorismate mutase/prephenate dehydratase | PLA106_12410 | Q9HZ67 | Positive | 2682869 - 2683963 | 40302.5 |
| prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase family protein | PLA106_12415 | Q0AA54 | Positive | 2684021 - 2685637 | 57387.3 |
| cytidylate kinase | PLA106_12420 | Q885T2 | Positive | 2685634 - 2686323 | 24635.6 |
| 30s ribosomal protein s1 | PLA106_12425 | Q9HZ71 | Positive | 2686445 - 2688136 | 62284.0 |
| integration host factor subunit beta | PLA106_12430 | Q885T0 | Positive | 2688452 - 2688748 | 11076.3 |
| hypothetical protein | PLA106_12435 | Not Available | Positive | 2688773 - 2689015 | 8770.54 |
| hypothetical protein | PLA106_12440 | Q5SLP1 | Positive | 2689428 - 2690870 | 53289.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
