Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-carboxymuconolactone decarboxylase | PLA106_09222 | Not Available | Negative | 1997653 - 1998051 | 15023.0 |
| 3-carboxy-cis,cis-muconate cycloisomerase | PLA106_09227 | Q9I6Q8 | Negative | 1998048 - 1999409 | 49214.5 |
| 4-hydroxybenzoate transporter | PLA106_09232 | Q9I6Q3 | Negative | 1999434 - 2000783 | 47200.8 |
| protocatechuate 3,4-dioxygenase, alpha subunit | PLA106_09237 | P00436 | Negative | 2000851 - 2001453 | 22335.3 |
| protocatechuate 3,4-dioxygenase, beta subunit | PLA106_09242 | P00437 | Negative | 2001465 - 2002184 | 26765.9 |
| pca operon transcriptional activator pcaq | PLA106_09247 | P0A4T6 | Negative | 2002312 - 2003241 | 33653.1 |
| hypothetical protein | PLA106_09252 | Not Available | Negative | 2003280 - 2003522 | 9150.15 |
| exopolysaccharide production protein exoz, putative | PLA106_09257 | P26502 | Negative | 2003601 - 2004671 | 39942.0 |
| hypothetical protein | PLA106_09262 | Not Available | Positive | 2004824 - 2005019 | 7147.82 |
| hypothetical protein | PLA106_09267 | Not Available | Positive | 2005016 - 2005372 | 13762.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
