Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans M302278 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1221546 bp
Thymine Count
1219342 bp
Guanine Count
1725299 bp
Cytosine Count
1728997 bp
Genome Length
5895184 bp
Protein-coding Genes
5586 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-hydroxycinnamoyl coa hydratase/lyase | PLA106_05127 | O69762 | Positive | 1154666 - 1155496 | 31147.6 |
| vanillin dehydrogenase | PLA106_05132 | O69763 | Positive | 1155602 - 1157050 | 50313.5 |
| feruloyl-coa synthase | PLA106_05137 | E5XP76 | Positive | 1157206 - 1159092 | 68659.1 |
| thiolase family protein | PLA106_05142 | Q3T0R7 | Positive | 1159089 - 1160330 | 43283.1 |
| hypothetical protein | PLA106_05147 | Not Available | Positive | 1160495 - 1160839 | 13211.4 |
| hypothetical protein | PLA106_05152 | Not Available | Positive | 1160840 - 1161112 | 9838.96 |
| transcriptional regulator, lysr family protein | PLA106_05157 | Q05840 | Negative | 1161182 - 1162099 | 34335.1 |
| hypothetical protein | PLA106_05162 | Q881F7 | Positive | 1162226 - 1162981 | 27403.9 |
| hypothetical protein | PLA106_05167 | Not Available | Positive | 1163070 - 1163942 | 32364.7 |
| urea amidolyase-related protein | PLA106_05172 | Q7WY77 | Positive | 1163939 - 1164913 | 34196.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
