Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. mori 301020 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354052 bp
Thymine Count
1342331 bp
Guanine Count
1845277 bp
Cytosine Count
1851068 bp
Genome Length
6392728 bp
Protein-coding Genes
7524 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase, beta subunit | PSYMO_05303 | Not Available | Positive | 1015565 - 1016284 | 26670.8 |
| protocatechuate 3,4-dioxygenase, alpha subunit | PSYMO_05308 | Not Available | Positive | 1016296 - 1016898 | 22315.1 |
| 4-hydroxybenzoate transporter | PSYMO_05313 | Not Available | Positive | 1016985 - 1018334 | 47291.9 |
| 3-carboxy-cis,cis-muconate cycloisomerase | PSYMO_05318 | Not Available | Positive | 1018359 - 1019720 | 49137.3 |
| 4-carboxymuconolactone decarboxylase | PSYMO_05323 | Not Available | Positive | 1019717 - 1020115 | 15009.0 |
| oprd family outer membrane porin | PSYMO_05328 | Not Available | Negative | 1020368 - 1021624 | 46047.6 |
| hypothetical protein | PSYMO_05333 | Not Available | Positive | 1021885 - 1022772 | 31744.9 |
| transporter | PSYMO_05338 | Not Available | Negative | 1023011 - 1024348 | 49002.2 |
| hypothetical protein | PSYMO_05343 | Not Available | Positive | 1024671 - 1024781 | 4033.29 |
| tetr family transcriptional regulator | PSYMO_05358 | Not Available | Positive | 1026981 - 1027652 | 25559.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
