Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine-6-phosphate deacetylase | SAMN05421747_1036 | Not Available | Negative | 1142549 - 1143658 | 39255.3 |
| dna-binding transcriptional regulator of sugar metabolism, deor/glpr family | SAMN05421747_1037 | Not Available | Positive | 1143768 - 1144511 | 27001.9 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421747_1038 | Not Available | Positive | 1144524 - 1145855 | 49657.7 |
| polysaccharide pyruvyl transferase | SAMN05421747_1039 | Not Available | Positive | 1145857 - 1146804 | 36625.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421747_10310 | Not Available | Positive | 1146882 - 1147640 | 28967.5 |
| hypothetical protein | SAMN05421747_10311 | Not Available | Positive | 1147645 - 1147869 | 8536.55 |
| hypothetical protein | SAMN05421747_10312 | Not Available | Positive | 1147820 - 1148503 | 25186.8 |
| glutamate or tyrosine decarboxylase | SAMN05421747_10313 | Not Available | Negative | 1148608 - 1150038 | 53215.6 |
| protein of unknown function | SAMN05421747_10314 | Not Available | Positive | 1150714 - 1151319 | 23205.1 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05421747_10315 | Not Available | Positive | 1151316 - 1152005 | 25037.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
